BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A03SP1|AL428643
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1624 1693 0.0
>3x_Contig1624
Length = 12551
Score = 1693 bits (854), Expect = 0.0
Identities = 854/854 (100%)
Strand = Plus / Minus
Query: 1 gatccaagttcagtcggttttccactggaaacatctacactctgactcagtttcctattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5180 gatccaagttcagtcggttttccactggaaacatctacactctgactcagtttcctattg 5121
Query: 61 ttgctggtaagataataaatctaaagaatgttctgcagaaacactatgcggataattttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5120 ttgctggtaagataataaatctaaagaatgttctgcagaaacactatgcggataattttg 5061
Query: 121 ttgcagaaaacatcagtatagtcattagaggatcacagtccttgcattatttgaagaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5060 ttgcagaaaacatcagtatagtcattagaggatcacagtccttgcattatttgaagaagc 5001
Query: 181 tggttcaaactacttttggagactttcgtaccaagtccactatcaaatcacagtctttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5000 tggttcaaactacttttggagactttcgtaccaagtccactatcaaatcacagtctttct 4941
Query: 241 ccattgagtctttcaagaaattgcagaaagtctgggcggccagatatacagaaccgttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4940 ccattgagtctttcaagaaattgcagaaagtctgggcggccagatatacagaaccgttgt 4881
Query: 301 tcagtaaacaagaaccagagactccgaattcaatactgatacagtcctccaaagcaccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4880 tcagtaaacaagaaccagagactccgaattcaatactgatacagtcctccaaagcaccta 4821
Query: 361 tacttcgcttagtgttcccagtatctcaccaagaggccctgtttagtagatctgaactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4820 tacttcgcttagtgttcccagtatctcaccaagaggccctgtttagtagatctgaactga 4761
Query: 421 aaatattctccaaggtttggtctgatttgtttggtgacgaaagttcagggtcgattcata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4760 aaatattctccaaggtttggtctgatttgtttggtgacgaaagttcagggtcgattcata 4701
Query: 481 gtaagtttagcgctcgaaacatattaaccagacaggtgacacagttatctaagtttacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 gtaagtttagcgctcgaaacatattaaccagacaggtgacacagttatctaagtttacaa 4641
Query: 541 ttgacgatgaaggattggtgctacaatttgaattaactaatagtggatggaagacagggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4640 ttgacgatgaaggattggtgctacaatttgaattaactaatagtggatggaagacagggg 4581
Query: 601 tagaaagtttacttaccgatttattccagggtttcttgccctttttccaatcaatagatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 tagaaagtttacttaccgatttattccagggtttcttgccctttttccaatcaatagatc 4521
Query: 661 cagatgagatagcgcaatatttgaacgaatggaataccataaatttgcttcaatttatgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4520 cagatgagatagcgcaatatttgaacgaatggaataccataaatttgcttcaatttatgt 4461
Query: 721 accaggatctggataattctactatggataaatgttcagatttgtgctctgaactactgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 accaggatctggataattctactatggataaatgttcagatttgtgctctgaactactgc 4401
Query: 781 agtgtgaagacccacagtttattttgaataacagtattgccttctcatgcaatcgaaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 agtgtgaagacccacagtttattttgaataacagtattgccttctcatgcaatcgaaaag 4341
Query: 841 gttccgatatcggt 854
||||||||||||||
Sbjct: 4340 gttccgatatcggt 4327
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6495
Number of Sequences: 1807
Number of extensions: 6495
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)